All Questions
activenewesthottestmost voted
0
votes
0
answers
39
views

Good books on NGS for all levels

06 Jan, 09:02 Sequer11
0
votes
1
answer
654
views

Unaligned reads from Tophat alignments ?

08 Dec '11, 12:11 shershman1
0
votes
0
answers
77
views

What SAMtools sorting does to my data

01 Dec '11, 10:56 John11
0
votes
0
answers
117
views

VCFtools Tabix Error

30 Nov '11, 15:39 Lindo00711
0
votes
8
answers
1.8k
views

problem with novoalign generated sam file

31 Oct '11, 06:44 arguably11
0
votes
0
answers
196
views

TAbix error

29 Sep '11, 03:01 Neeba11
3
votes
2
answers
2.1k
views

Best mapping/SNP calling algorithm for deep coverage?

02 Feb '11, 15:51 ECO ♦♦186
0
votes
4
answers
1.8k
views

Basic reads statistics

28 Dec '10, 22:58 gshenguo(suspended)
5
votes
6
answers
2.0k
views

need 1000 genome data for just small parts of sequences

28 Dec '10, 22:53 gshenguo(suspended)
1
vote
3
answers
2.4k
views

Optimal parameters for Bowtie/BWA on SOLiD

28 Dec '10, 22:51 gshenguo(suspended)
1
vote
2
answers
2.9k
views

Converting AB SOLID color space reads to FASTQ format

28 Dec '10, 22:45 gshenguo(suspended)
2
votes
1
answer
1.9k
views

Illumina read quality scores

28 Dec '10, 22:43 gshenguo(suspended)
5
votes
7
answers
7.9k
views

What do you think of the OSQA system as an alternative/supplement to the vBulletin forums?

28 Dec '10, 22:37 gshenguo(suspended)
0
votes
2
answers
704
views

Sequencing small DNA

28 Dec '10, 22:35 gshenguo(suspended)
0
votes
0
answers
546
views

bowtie insert size

16 Dec '10, 08:57 dawe61
0
votes
1
answer
995
views

FASTX tool kit

16 Dec '10, 08:53 dawe61
0
votes
0
answers
707
views

Cufflinks Cuffdiff TSS

09 Dec '10, 12:37 jamminbeh1
0
votes
0
answers
607
views

Cufflinks Cuffdiff gene expression comparison

08 Dec '10, 22:37 blakeehaas1
0
votes
0
answers
405
views

bwa alternative hits considered by samtools?

06 Dec '10, 17:22 jmchan1
0
votes
0
answers
431
views

Variant effect predictor with VCF support

20 Nov '10, 13:22 dawe61
1
vote
4
answers
735
views

How to detect variants using 1Kgenomes data?

19 Nov '10, 05:31 JMFA16
0
votes
1
answer
569
views

edgeR, how to get the IDs of my DE analysis, and how to save them to a file?

10 Nov '10, 14:28 Jeffrey Hsu1
0
votes
0
answers
489
views

convert SAM to BLAST

29 Oct '10, 15:33 mrawlins431
0
votes
0
answers
592
views

shell -comm

24 Oct '10, 11:36 gqy21
0
votes
1
answer
851
views

How to eliminate repetitive regions in the reference dataset by bwa or bowtie alignment

22 Oct '10, 02:11 dawe61
0
votes
2
answers
700
views

Extracting an up stream or downstream sequence from given position

20 Oct '10, 08:07 dawe61
0
votes
1
answer
597
views

What mapper uses these parameters?

17 Oct '10, 06:18 jts16
1
vote
1
answer
797
views

solid adapters ligation

15 Oct '10, 16:24 mrawlins431
1
vote
1
answer
1.7k
views

Coverage for RNA-seq analysis

13 Oct '10, 17:37 mnkyboy31
0
votes
1
answer
1.3k
views

heterozygous sites snp

13 Oct '10, 15:19 avilella76

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